Thursday, February 24, 2011

Started HCV linkage code

started code on linkage analysis:
python AnalysisCode.py --link-lanl --data-dir HCVData/ --workers 3 -max-width 5
on code: a792bca5d5d14506b83f1af96a0f0c3201a5c232
So it will calculate single linkages between all pairs with a max-width of 5. It will also find linkage p-values for anything with a value greater than 80%.

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